STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ83070.1Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: pjd:Pjdr2_0978 ABC transporter related; SMART: ATPase, AAA+ type, core. (508 aa)    
Predicted Functional Partners:
ADZ83071.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: cst:CLOST_0544 D-xylose transporter subunit; membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family.
  
 0.959
ADZ83069.1
KEGG: cag:Cagg_2576 periplasmic sugar-binding protein.
  
 0.936
ADZ82247.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: cce:Ccel_1225 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.935
ADZ82248.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: cce:Ccel_1226 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.933
ADZ82245.1
PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: cce:Ccel_1223 periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.929
ADZ83068.1
PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: csh:Closa_3813 periplasmic binding protein/LacI transcriptional regulator.
  
 0.892
ADZ83065.1
KEGG: cpy:Cphy_1581 ABC-type sugar transport system periplasmic component-like protein.
 
 
 0.861
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.709
ADZ83112.1
PfkB domain protein; PFAM: Carbohydrate/purine kinase; KEGG: cbf:CLI_1764 PfkB family kinase.
  
  
 0.613
ADZ83067.1
KEGG: csh:Closa_3814 two component transcriptional regulator, AraC family; PFAM: Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; Signal transduction response regulator, receiver domain.
 
    0.581
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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