STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ83276.1Arginine decarboxylase; KEGG: dhd:Dhaf_0181 Orn/Lys/Arg decarboxylase major region; PFAM: Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, C-terminal. (483 aa)    
Predicted Functional Partners:
ADZ83109.1
Agmatinase; TIGRFAM: Putative agmatinase; KEGG: cce:Ccel_2434 agmatinase; PFAM: Ureohydrolase; Belongs to the arginase family.
 
 
 0.972
speE-2
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
  
 0.944
argH
TIGRFAM: Argininosuccinate lyase; KEGG: cth:Cthe_0178 argininosuccinate lyase; PFAM: Lyase 1, N-terminal.
     
 0.818
ADZ83278.1
PFAM: Saccharopine dehydrogenase / Homospermidine synthase; KEGG: bha:BH3957 hypothetical protein.
 
   
 0.806
ADZ83279.1
KEGG: cbe:Cbei_4408 carboxynorspermidine decarboxylase; TIGRFAM: Carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, C-terminal; Orn/DAP/Arg decarboxylase 2, N-terminal.
 
   
 0.799
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
  
 0.737
ADZ84266.1
PFAM: Radical SAM; KEGG: eel:EUBELI_01391 hypothetical protein.
 
     0.481
ADZ83947.1
Aluminum resistance family protein; PFAM: Aluminium resistance; KEGG: cpy:Cphy_2378 aluminium resistance family protein.
 
   
 0.426
speD
S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.
     
 0.400
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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