STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ83715.1PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: csc:Csac_1644 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
ADZ85916.1
KEGG: csh:Closa_2485 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; Glutamine amidotransferase, class-II.
     
 0.574
ADZ84387.1
PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: emi:Emin_0757 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.569
ADZ83716.1
Hypothetical protein.
       0.522
ADZ83717.1
Hypothetical protein.
       0.452
ADZ83718.1
Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
       0.408
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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