STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ83740.1Beta-lactamase domain protein; KEGG: cpf:CPF_1269 rubredoxin/flavodoxin/oxidoreductase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like. (402 aa)    
Predicted Functional Partners:
ADZ83739.1
Hemerythrin-like metal-binding protein; TIGRFAM: Haemerythrin-like, metal-binding; KEGG: cpy:Cphy_1653 hemerythrin-like metal-binding protein.
  
  
 0.716
ADZ83934.1
Desulfoferrodoxin ferrous iron-binding region; KEGG: cdf:CD0827 rubredoxin oxidoreductase (desulfoferrodoxin); TIGRFAM: Desulfoferrodoxin, ferrous iron-binding domain; Desulfoferrodoxin Dfx; PFAM: Desulfoferrodoxin, ferrous iron-binding domain; Desulfoferrodoxin Dfx.
  
 0.713
ADZ82358.1
PFAM: Rubrerythrin; KEGG: cbe:Cbei_1416 rubrerythrin.
 
  
 0.712
ADZ83741.1
SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: cdl:CDR20291_2570 pyruvate-flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate-flavodoxin oxidoreductase, EKR domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain.
  
  
 0.666
ADZ84871.1
PFAM: Rubrerythrin; KEGG: cce:Ccel_1869 rubrerythrin.
 
  
 0.628
ADZ84735.1
CoA-disulfide reductase; KEGG: cdl:CDR20291_2427 coenzyme A disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation.
    
 0.588
ADZ83703.1
Helix-turn-helix domain protein; KEGG: csh:Closa_3195 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; Desulfoferrodoxin Dfx; Desulfoferrodoxin, ferrous iron-binding domain; SMART: Helix-turn-helix type 3.
  
  
 0.584
ADZ82003.1
Hemerythrin-like metal-binding protein; TIGRFAM: Haemerythrin-like, metal-binding; KEGG: cpy:Cphy_1653 hemerythrin-like metal-binding protein.
  
  
 0.511
ADZ84235.1
Hemerythrin-like metal-binding protein; TIGRFAM: Haemerythrin-like, metal-binding; KEGG: cbe:Cbei_3426 hemerythrin-like metal-binding protein.
  
  
 0.511
ADZ84522.1
PFAM: BFD-like [2Fe-2S]-binding domain; KEGG: cpr:CPR_0435 BFD-like iron-sulfur cluster-binding protein.
 
  
 0.507
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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