STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ83937.1KEGG: cbe:Cbei_1924 aspartate aminotransferase; TIGRFAM: Aspartate 4-decarboxylase; PFAM: Aminotransferase, class I/classII. (543 aa)    
Predicted Functional Partners:
argG
TIGRFAM: Argininosuccinate synthase; KEGG: cpy:Cphy_1931 argininosuccinate synthase; PFAM: Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 0.917
ADZ85386.1
KEGG: cbe:Cbei_1034 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase.
  
 
 0.917
ADZ84214.1
Acetylornithine transaminase; KEGG: gym:GYMC10_0624 aminotransferase class-III; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 0.915
ADZ85632.1
Aspartate racemase; KEGG: cdl:CDR20291_2154 putative amino acid recemase; TIGRFAM: Aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; Belongs to the aspartate/glutamate racemases family.
  
  
  0.915
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 0.913
ADZ84186.1
PFAM: Asparaginase/glutaminase; KEGG: cst:CLOST_1447 L-asparaginase; SMART: Asparaginase/glutaminase.
    
 0.909
ADZ83317.1
L-aspartate oxidase; Manually curated; KEGG: elm:ELI_3094 hypothetical protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal.
   
 
 0.908
ADZ82779.1
TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; KEGG: eel:EUBELI_01276 asparagine synthase (glutamine-hydrolysing); PFAM: Asparagine synthase.
   
 
 0.905
pyrB
TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; KEGG: cce:Ccel_0612 aspartate carbamoyltransferase catalytic subunit; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.904
asnA
TIGRFAM: Aspartate--ammonia ligase; KEGG: cbi:CLJ_B1606 asparagine synthetase AsnA; PFAM: Aspartate--ammonia ligase.
     
 0.903
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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