STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ84210.1KEGG: csh:Closa_4257 NlpA lipoprotein. (326 aa)    
Predicted Functional Partners:
ADZ84208.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: csh:Closa_4259 binding-protein-dependent transport systems inner membrane component.
 
  
 0.926
ADZ84209.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: toc:Toce_1345 ABC transporter related protein; SMART: ATPase, AAA+ type, core.
 
  
 0.894
ADZ82178.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tjr:TherJR_0601 binding-protein-dependent transport systems inner membrane component.
 
  
 0.766
ADZ84212.1
KEGG: csh:Closa_4255 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase-related; PFAM: UbiA prenyltransferase; Belongs to the UbiA prenyltransferase family.
 
     0.758
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
     0.745
ADZ85715.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: brm:Bmur_1575 binding-protein-dependent transport systems inner membrane component.
 
  
 0.736
ADZ82278.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: cbe:Cbei_1939 binding-protein-dependent transport systems inner membrane component.
 
  
 0.720
ADZ84213.1
Menaquinone biosynthesis decarboxylase, SCO4490 family; KEGG: toc:Toce_1349 3-octaprenyl-4hydroxybenzoate decarboxylase; TIGRFAM: Menaquinone biosynthesis decarboxylase, SCO4490; Carboxylyase-related; PFAM: Carboxylyase-related; Belongs to the UbiD family.
 
     0.707
ADZ84214.1
Acetylornithine transaminase; KEGG: gym:GYMC10_0624 aminotransferase class-III; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.702
ADZ83124.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: cbl:CLK_0812 putative ABC transporter, permease protein.
 
  
 0.617
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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