STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ84391.1PFAM: Uncharacterised protein family LrgA/YohJ; KEGG: clj:CLJU_c33090 hypothetical protein. (124 aa)    
Predicted Functional Partners:
ADZ84390.1
PFAM: LrgB-like protein; KEGG: cpy:Cphy_0707 LrgB family protein.
 
  
 0.992
ADZ84389.1
KEGG: cpy:Cphy_1313 regulatory protein GntR HTH; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal.
     
 0.695
ADZ84388.1
PFAM: Mechanosensitive ion channel MscS; KEGG: mtt:Ftrac_0318 mscs mechanosensitive ion channel.
       0.572
ADZ84392.1
PFAM: Protein of unknown function DUF1696; Uncharacterised protein family YvbH-like, oligomerisation region; KEGG: ccb:Clocel_4160 hypothetical protein.
       0.469
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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