STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ84821.1Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ere:EUBREC_3017 hypothetical protein. (189 aa)    
Predicted Functional Partners:
ADZ84822.1
KEGG: cce:Ccel_1981 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein; PFAM: Multi antimicrobial extrusion protein.
       0.701
ADZ84819.1
Radical SAM domain protein; KEGG: mla:Mlab_0177 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
 
     0.566
mprF-2
Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
 
     0.565
ADZ84820.1
Hypothetical protein; Probably functions as a manganese efflux pump.
 
     0.525
ADZ82398.1
PFAM: Streptococcal 67kDa myosin-cross-reactive antigen-like; KEGG: cbk:CLL_A2829 myosin-cross-reactive antigen.
 
     0.458
ADZ84823.1
PFAM: Protein of unknown function DUF124; KEGG: cbe:Cbei_4068 hypothetical protein.
       0.432
ADZ84824.1
Hypothetical protein.
       0.432
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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