STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ84888.1KEGG: ccb:Clocel_1468 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; Transcription regulator MerR, DNA binding; SMART: HTH transcriptional regulator, MerR. (129 aa)    
Predicted Functional Partners:
ADZ84890.1
PFAM: Cupin 2, conserved barrel; KEGG: ssm:Spirs_4180 cupin 2 conserved barrel domain protein.
 
  
 0.683
ADZ84889.1
PFAM: NADPH-dependent FMN reductase; KEGG: gbm:Gbem_0784 multimeric flavodoxin family protein.
 
    0.663
ADZ82148.1
KEGG: cbe:Cbei_1414 heat shock protein DnaJ domain-containing protein.
  
 
 0.458
dnaJ
Chaperone protein dnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
  
 
 0.458
ADZ84333.1
KEGG: aar:Acear_1400 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ-like protein DjlA; SMART: Heat shock protein DnaJ, N-terminal.
  
 
 0.458
ADZ85917.1
TIGRFAM: Glutamine synthetase type I; KEGG: dhd:Dhaf_0994 glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp.
  
 
 0.450
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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