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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ84897.1KEGG: cth:Cthe_1184 hypothetical protein. (221 aa)    
Predicted Functional Partners:
ADZ84898.1
KEGG: cth:Cthe_1185 hypothetical protein.
     0.987
ADZ84899.1
KEGG: cth:Cthe_1186 alpha/beta hydrolase fold-3.
 
     0.932
ADZ82787.1
KEGG: cce:Ccel_1994 hypothetical protein.
  
     0.575
ADZ84896.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: tmt:Tmath_1409 copper amine oxidase domain protein.
       0.545
ADZ84900.1
PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: clj:CLJU_c19830 hypothetical protein.
       0.521
ADZ84349.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: amt:Amet_4739 extracellular solute-binding protein.
  
    0.447
ADZ82983.1
KEGG: clj:CLJU_c32920 hypothetical protein.
  
     0.410
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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