Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADZ84897.1 | ADZ84898.1 | Clole_3203 | Clole_3204 | KEGG: cth:Cthe_1184 hypothetical protein. | KEGG: cth:Cthe_1185 hypothetical protein. | 0.987 |
ADZ84897.1 | ADZ84899.1 | Clole_3203 | Clole_3205 | KEGG: cth:Cthe_1184 hypothetical protein. | KEGG: cth:Cthe_1186 alpha/beta hydrolase fold-3. | 0.932 |
ADZ84897.1 | ADZ84900.1 | Clole_3203 | Clole_3206 | KEGG: cth:Cthe_1184 hypothetical protein. | PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: clj:CLJU_c19830 hypothetical protein. | 0.521 |
ADZ84898.1 | ADZ84897.1 | Clole_3204 | Clole_3203 | KEGG: cth:Cthe_1185 hypothetical protein. | KEGG: cth:Cthe_1184 hypothetical protein. | 0.987 |
ADZ84898.1 | ADZ84899.1 | Clole_3204 | Clole_3205 | KEGG: cth:Cthe_1185 hypothetical protein. | KEGG: cth:Cthe_1186 alpha/beta hydrolase fold-3. | 0.941 |
ADZ84898.1 | ADZ84900.1 | Clole_3204 | Clole_3206 | KEGG: cth:Cthe_1185 hypothetical protein. | PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: clj:CLJU_c19830 hypothetical protein. | 0.557 |
ADZ84899.1 | ADZ84897.1 | Clole_3205 | Clole_3203 | KEGG: cth:Cthe_1186 alpha/beta hydrolase fold-3. | KEGG: cth:Cthe_1184 hypothetical protein. | 0.932 |
ADZ84899.1 | ADZ84898.1 | Clole_3205 | Clole_3204 | KEGG: cth:Cthe_1186 alpha/beta hydrolase fold-3. | KEGG: cth:Cthe_1185 hypothetical protein. | 0.941 |
ADZ84899.1 | ADZ84900.1 | Clole_3205 | Clole_3206 | KEGG: cth:Cthe_1186 alpha/beta hydrolase fold-3. | PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: clj:CLJU_c19830 hypothetical protein. | 0.551 |
ADZ84900.1 | ADZ84897.1 | Clole_3206 | Clole_3203 | PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: clj:CLJU_c19830 hypothetical protein. | KEGG: cth:Cthe_1184 hypothetical protein. | 0.521 |
ADZ84900.1 | ADZ84898.1 | Clole_3206 | Clole_3204 | PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: clj:CLJU_c19830 hypothetical protein. | KEGG: cth:Cthe_1185 hypothetical protein. | 0.557 |
ADZ84900.1 | ADZ84899.1 | Clole_3206 | Clole_3205 | PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: clj:CLJU_c19830 hypothetical protein. | KEGG: cth:Cthe_1186 alpha/beta hydrolase fold-3. | 0.551 |
ADZ84900.1 | ADZ84901.1 | Clole_3206 | Clole_3207 | PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: clj:CLJU_c19830 hypothetical protein. | Phosphoribosylaminoimidazolecarboxamide formyltransferase; PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; KEGG: ere:EUBREC_1567 5-aminoimidazole-4-carboxamide ribonucleotide transformylase; SMART: AICARFT/IMPCHase bienzyme, transformylase domain. | 0.440 |
ADZ84901.1 | ADZ84900.1 | Clole_3207 | Clole_3206 | Phosphoribosylaminoimidazolecarboxamide formyltransferase; PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; KEGG: ere:EUBREC_1567 5-aminoimidazole-4-carboxamide ribonucleotide transformylase; SMART: AICARFT/IMPCHase bienzyme, transformylase domain. | PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: clj:CLJU_c19830 hypothetical protein. | 0.440 |