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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ84903.1PFAM: Major facilitator superfamily MFS-1; KEGG: amt:Amet_3770 major facilitator transporter. (415 aa)    
Predicted Functional Partners:
ADZ84907.1
ABC-type transporter, periplasmic subunit; PFAM: Periplasmic binding protein; KEGG: cbe:Cbei_2138 periplasmic binding protein.
 
     0.659
ADZ84904.1
Iron-chelate-transporting ATPase; PFAM: ABC transporter-like; KEGG: amt:Amet_3771 ABC transporter related; SMART: ATPase, AAA+ type, core.
       0.596
ADZ84905.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease protein; KEGG: cdl:CDR20291_2772 putative ferrichrome ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.563
ADZ84906.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease protein; KEGG: cbe:Cbei_2139 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.563
ADZ84902.1
PFAM: Inosine monophosphate cyclohydrolase-like; KEGG: ere:EUBREC_1566 hypothetical protein.
       0.407
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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