Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADZ83150.1 | ADZ85081.1 | Clole_1424 | Clole_3393 | Hypothetical protein; KEGG: aoe:Clos_0736 integrase catalytic region. | Transposase IS3/IS911 family protein; KEGG: lin:pli0077 hypothetical protein; manually curated; PFAM: Transposase IS3/IS911family. | 0.642 |
ADZ85079.1 | ADZ85080.1 | Clole_3391 | Clole_3392 | Hypothetical protein. | TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: PKD domain; Fibronectin, type III; YD repeat; KEGG: bbe:BBR47_44600 hypothetical protein; SMART: Fibronectin, type III; PKD/Chitinase domain. | 0.773 |
ADZ85079.1 | ADZ85081.1 | Clole_3391 | Clole_3393 | Hypothetical protein. | Transposase IS3/IS911 family protein; KEGG: lin:pli0077 hypothetical protein; manually curated; PFAM: Transposase IS3/IS911family. | 0.504 |
ADZ85080.1 | ADZ85079.1 | Clole_3392 | Clole_3391 | TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: PKD domain; Fibronectin, type III; YD repeat; KEGG: bbe:BBR47_44600 hypothetical protein; SMART: Fibronectin, type III; PKD/Chitinase domain. | Hypothetical protein. | 0.773 |
ADZ85080.1 | ADZ85081.1 | Clole_3392 | Clole_3393 | TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: PKD domain; Fibronectin, type III; YD repeat; KEGG: bbe:BBR47_44600 hypothetical protein; SMART: Fibronectin, type III; PKD/Chitinase domain. | Transposase IS3/IS911 family protein; KEGG: lin:pli0077 hypothetical protein; manually curated; PFAM: Transposase IS3/IS911family. | 0.508 |
ADZ85081.1 | ADZ83150.1 | Clole_3393 | Clole_1424 | Transposase IS3/IS911 family protein; KEGG: lin:pli0077 hypothetical protein; manually curated; PFAM: Transposase IS3/IS911family. | Hypothetical protein; KEGG: aoe:Clos_0736 integrase catalytic region. | 0.642 |
ADZ85081.1 | ADZ85079.1 | Clole_3393 | Clole_3391 | Transposase IS3/IS911 family protein; KEGG: lin:pli0077 hypothetical protein; manually curated; PFAM: Transposase IS3/IS911family. | Hypothetical protein. | 0.504 |
ADZ85081.1 | ADZ85080.1 | Clole_3393 | Clole_3392 | Transposase IS3/IS911 family protein; KEGG: lin:pli0077 hypothetical protein; manually curated; PFAM: Transposase IS3/IS911family. | TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: PKD domain; Fibronectin, type III; YD repeat; KEGG: bbe:BBR47_44600 hypothetical protein; SMART: Fibronectin, type III; PKD/Chitinase domain. | 0.508 |