Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADZ85370.1 | ADZ85371.1 | Clole_3687 | Clole_3688 | PFAM: Type IV pilus assembly PilZ. | 3-isopropylmalate dehydratase; KEGG: cpy:Cphy_2458 hypothetical protein; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha. | 0.574 |
ADZ85370.1 | ADZ85372.1 | Clole_3687 | Clole_3689 | PFAM: Type IV pilus assembly PilZ. | PFAM: Bacterial extracellular solute-binding, family 1; KEGG: ccb:Clocel_2594 extracellular solute-binding protein family 1. | 0.406 |
ADZ85371.1 | ADZ85370.1 | Clole_3688 | Clole_3687 | 3-isopropylmalate dehydratase; KEGG: cpy:Cphy_2458 hypothetical protein; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha. | PFAM: Type IV pilus assembly PilZ. | 0.574 |
ADZ85371.1 | ADZ85372.1 | Clole_3688 | Clole_3689 | 3-isopropylmalate dehydratase; KEGG: cpy:Cphy_2458 hypothetical protein; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha. | PFAM: Bacterial extracellular solute-binding, family 1; KEGG: ccb:Clocel_2594 extracellular solute-binding protein family 1. | 0.536 |
ADZ85372.1 | ADZ85370.1 | Clole_3689 | Clole_3687 | PFAM: Bacterial extracellular solute-binding, family 1; KEGG: ccb:Clocel_2594 extracellular solute-binding protein family 1. | PFAM: Type IV pilus assembly PilZ. | 0.406 |
ADZ85372.1 | ADZ85371.1 | Clole_3689 | Clole_3688 | PFAM: Bacterial extracellular solute-binding, family 1; KEGG: ccb:Clocel_2594 extracellular solute-binding protein family 1. | 3-isopropylmalate dehydratase; KEGG: cpy:Cphy_2458 hypothetical protein; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha. | 0.536 |