STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ85853.1PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cno:NT01CX_0219 short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (250 aa)    
Predicted Functional Partners:
ADZ85852.1
Putative transcriptional regulator, Crp/Fnr family; KEGG: ppm:PPSC2_c1988 protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain.
 
   
 0.678
ADZ85848.1
Arsenite-activated ATPase ArsA; KEGG: cpy:Cphy_1698 arsenite-transporting ATPase; TIGRFAM: ATPase, anion-transporting.
 
     0.436
ADZ85850.1
KEGG: cpy:Cphy_1697 arsenite-activated ATPase ArsA; TIGRFAM: ATPase, anion-transporting.
 
     0.427
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.