STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ85923.1KEGG: cdl:CDR20291_1516 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (232 aa)    
Predicted Functional Partners:
ADZ85922.1
KEGG: cdl:CDR20291_1517 putative ABC transporter, peremase protein.
 
    0.965
ADZ85924.1
Manually curated; PFAM: HTH transcriptional regulator, GntR; KEGG: cdl:CDR20291_1515 GntR-family transcriptional regulator; SMART: HTH transcriptional regulator, GntR.
 
  
 0.965
ADZ85921.1
PFAM: Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon domain; KEGG: cbk:CLL_A1997 hypothetical protein.
       0.607
ADZ85289.1
KEGG: thx:Thet_0145 flagellar basal-body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; flagellar hook-basal body protein, FlgE/F/G; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal.
   
  
 0.527
ADZ85042.1
PFAM: ABC-2 type transporter; KEGG: cow:Calow_2095 hypothetical protein.
  
 
 0.508
ADZ84770.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: cpo:COPRO5265_0892 daunorubicin resistance ATP-binding protein DrrA; SMART: ATPase, AAA+ type, core.
 
   
0.502
ADZ84339.1
KEGG: bha:BH0817 hypothetical protein.
  
 
 0.469
ADZ85724.1
KEGG: dsy:DSY2794 hypothetical protein.
  
 
 0.453
ADZ85925.1
Transposase; Manually curated; KEGG: cbe:Cbei_4478 hypothetical protein.
       0.450
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.