STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR88332.1Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. (513 aa)    
Predicted Functional Partners:
SDR88313.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.915
SDS82725.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
  
 
0.697
SDS84106.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
  
 
0.696
SDR88378.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.630
SDR88233.1
Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
       0.620
SDR88267.1
Hypothetical protein.
       0.620
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
   0.610
SDS91017.1
Short chain enoyl-CoA hydratase.
  
 
 
 0.587
SDS34615.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
   0.575
SDS84270.1
Acetyl esterase/lipase.
 
  0.567
Your Current Organism:
Marmoricola scoriae
NCBI taxonomy Id: 642780
Other names: DSM 22127, JCM 17444, KCTC 19597, M. scoriae, Marmoricola scoriae Lee and Lee 2010, Marmoricola sp. Sco-D01, strain Sco-D01
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