STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS07551.1Regulatory protein, tetR family. (188 aa)    
Predicted Functional Partners:
SDS07497.1
FBP C-terminal treble-clef zinc-finger.
 
     0.867
SDS01874.1
Methyltransferase domain-containing protein.
  
     0.571
SDS07589.1
Carbon monoxide dehydrogenase subunit G.
       0.550
SDS07441.1
FAD/FMN-containing dehydrogenase.
       0.479
SDS07637.1
Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.444
SDS07717.1
Arsenite transporter, ACR3 family.
 
     0.434
SDS08472.1
Methyltransferase domain-containing protein.
  
     0.422
SDT16126.1
Fatty acid synthase, bacterial type.
    
 0.406
Your Current Organism:
Marmoricola scoriae
NCBI taxonomy Id: 642780
Other names: DSM 22127, JCM 17444, KCTC 19597, M. scoriae, Marmoricola scoriae Lee and Lee 2010, Marmoricola sp. Sco-D01, strain Sco-D01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.