STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS16239.1Spermidine/putrescine transport system substrate-binding protein. (395 aa)    
Predicted Functional Partners:
SDS16140.1
Spermidine/putrescine transport system permease protein.
 
 0.999
SDS16175.1
Spermidine/putrescine transport system permease protein.
 
 
 0.998
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.996
SDS22431.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.948
SDS16100.1
Glycine/D-amino acid oxidase.
 
     0.940
SDS22397.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.929
SDS66687.1
Thiamine transport system ATP-binding protein.
 
 
 0.902
SDR91034.1
Molybdate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.873
SDS16360.1
Glycine/D-amino acid oxidase.
 
   
 0.864
SDS16284.1
Transcriptional regulator, AsnC family.
 
     0.749
Your Current Organism:
Marmoricola scoriae
NCBI taxonomy Id: 642780
Other names: DSM 22127, JCM 17444, KCTC 19597, M. scoriae, Marmoricola scoriae Lee and Lee 2010, Marmoricola sp. Sco-D01, strain Sco-D01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.