STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS53583.1Steroid 5-alpha reductase family enzyme. (257 aa)    
Predicted Functional Partners:
SDS53471.1
Predicted NAD/FAD-binding protein.
    0.976
SDS53526.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
    0.949
SDS53544.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
     0.898
SDS53423.1
Putative zinc-finger.
 
     0.834
SDS53376.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.789
SDS53625.1
Hypothetical protein.
       0.757
SDS53330.1
Uncaracterized surface protein containing fasciclin (FAS1) repeats.
 
     0.713
SDR95769.1
Alpha/beta hydrolase family protein.
 
     0.536
SDT17122.1
Alpha/beta hydrolase family protein.
 
     0.535
SDS53315.1
DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.
       0.435
Your Current Organism:
Marmoricola scoriae
NCBI taxonomy Id: 642780
Other names: DSM 22127, JCM 17444, KCTC 19597, M. scoriae, Marmoricola scoriae Lee and Lee 2010, Marmoricola sp. Sco-D01, strain Sco-D01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.