STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS63365.1Transglycosylase SLT domain-containing protein. (420 aa)    
Predicted Functional Partners:
SDS63775.1
Hypothetical protein.
  
     0.555
SDS63110.1
Cytochrome c biogenesis protein.
 
     0.525
SDS63070.1
Cytochrome c-type biogenesis protein CcsB.
       0.463
SDS63165.1
Cytochrome c-type biogenesis protein.
       0.463
SDS63197.1
Thiol-disulfide isomerase or thioredoxin.
       0.463
SDS63241.1
Broad specificity phosphatase PhoE.
       0.463
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
       0.463
crcB-2
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
   
  
 0.437
SDS51852.1
Cell division protein FtsB; Manually curated.
 
     0.436
SDR70379.1
Peptidoglycan synthetase FtsI.
   
   0.418
Your Current Organism:
Marmoricola scoriae
NCBI taxonomy Id: 642780
Other names: DSM 22127, JCM 17444, KCTC 19597, M. scoriae, Marmoricola scoriae Lee and Lee 2010, Marmoricola sp. Sco-D01, strain Sco-D01
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.