STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS80660.1Alpha,alpha-trehalose phosphorylase. (859 aa)    
Predicted Functional Partners:
SDS80636.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/beta-phosphoglucomutase family hydrolase.
 
 0.998
SDS91800.1
Maltooligosyl trehalose hydrolase.
 
 
 0.930
SDT05326.1
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 0.916
SDT16521.1
Trehalose synthase.
  
 
 0.913
SDR98390.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
 
 
 0.776
SDT05185.1
Trehalose 6-phosphate synthase.
    
 0.763
SDS79566.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
  
 
 0.716
SDS69625.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
     
 0.707
SDT10516.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
     
 0.707
SDS34049.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
  
 0.655
Your Current Organism:
Marmoricola scoriae
NCBI taxonomy Id: 642780
Other names: DSM 22127, JCM 17444, KCTC 19597, M. scoriae, Marmoricola scoriae Lee and Lee 2010, Marmoricola sp. Sco-D01, strain Sco-D01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.