STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT04717.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (452 aa)    
Predicted Functional Partners:
SDT04637.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.999
SDT04678.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.999
SDR73057.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.939
SDS49427.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.939
SDT04620.1
Mannitol 2-dehydrogenase.
 
    0.939
SDR73034.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.933
SDS69337.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.922
SDR73015.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.785
SDS72397.1
Multiple sugar transport system permease protein.
  
 0.765
SDS78741.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 0.765
Your Current Organism:
Marmoricola scoriae
NCBI taxonomy Id: 642780
Other names: DSM 22127, JCM 17444, KCTC 19597, M. scoriae, Marmoricola scoriae Lee and Lee 2010, Marmoricola sp. Sco-D01, strain Sco-D01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.