STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT15236.1Hypothetical protein. (430 aa)    
Predicted Functional Partners:
SDT00155.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.741
SDT04378.1
Hypothetical protein.
  
     0.732
SDS34451.1
Hypothetical protein.
  
     0.727
SDS82456.1
D-alanyl-D-alanine carboxypeptidase.
 
     0.727
SDS88034.1
Hypothetical protein.
  
     0.722
SDS34482.1
Hypothetical protein.
  
     0.718
SDS65934.1
Protein of unknown function.
  
     0.705
SDS25313.1
Septum formation.
  
     0.679
SDR96661.1
Hypothetical protein.
  
     0.662
SDS52469.1
Acetyltransferase (GNAT) family protein.
  
     0.626
Your Current Organism:
Marmoricola scoriae
NCBI taxonomy Id: 642780
Other names: DSM 22127, JCM 17444, KCTC 19597, M. scoriae, Marmoricola scoriae Lee and Lee 2010, Marmoricola sp. Sco-D01, strain Sco-D01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.