STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT15493.1Lysophospholipase, alpha-beta hydrolase superfamily. (302 aa)    
Predicted Functional Partners:
SDT16126.1
Fatty acid synthase, bacterial type.
  
 
 0.814
SDS59566.1
Hypothetical protein.
    
  0.641
SDS01310.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
  0.571
SDS61417.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
  0.557
SDT15544.1
PH domain-containing protein.
  
    0.541
SDT15511.1
Hypothetical protein.
       0.539
SDR82564.1
Acyl carrier protein.
   
  0.512
SDS97208.1
Hypothetical protein.
    
  0.505
SDS46336.1
3-hydroxybutyrate dehydrogenase.
  
   0.457
SDS90555.1
2,4-dienoyl-CoA reductase (NADPH2).
  
 
 0.441
Your Current Organism:
Marmoricola scoriae
NCBI taxonomy Id: 642780
Other names: DSM 22127, JCM 17444, KCTC 19597, M. scoriae, Marmoricola scoriae Lee and Lee 2010, Marmoricola sp. Sco-D01, strain Sco-D01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.