STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332295_02149Unannotated protein. (229 aa)    
Predicted Functional Partners:
GCA_000332295_03065
Unannotated protein.
  
    0.542
GCA_000332295_02150
Unannotated protein.
       0.486
GCA_000332295_03454
Unannotated protein.
 
      0.436
GCA_000332295_02810
Unannotated protein.
    
 
 0.433
GCA_000332295_01344
Unannotated protein.
    
   0.414
GCA_000332295_03882
Unannotated protein.
      
 0.412
Your Current Organism:
Fortiea contorta
NCBI taxonomy Id: 643473
Other names: F. contorta PCC 7126, Fortiea contorta PCC 7126, Microchaete sp. PCC 7126, Microchaete tenera PCC 7126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.