STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daes_0490PFAM: plasmid stabilization system; KEGG: rhi:NGR_a02800 conserved hypothetical 11.0 kDa protein. (91 aa)    
Predicted Functional Partners:
Daes_0489
KEGG: dsa:Desal_2183 transcriptional regulator, CopG family.
  
 
 0.979
Daes_0463
TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: dba:Dbac_2571 XRE family plasmid maintenance system antidote protein; SMART: helix-turn-helix domain protein.
 
   
 0.544
Daes_0491
PFAM: filamentation induced by cAMP protein Fic; KEGG: rrs:RoseRS_0276 filamentation induced by cAMP protein Fic.
 
     0.528
Daes_0488
KEGG: mbr:MONBRDRAFT_28694 hypothetical protein.
       0.486
Daes_0492
KEGG: dde:Dde_2910 transcriptional regulator.
       0.419
Daes_2391
PFAM: DNA circulation family protein; KEGG: pol:Bpro_3737 DNA circulation-like.
  
     0.407
Daes_2025
KEGG: dma:DMR_38750 hypothetical protein; Contains selenocysteine; manually curated.
  
     0.401
Your Current Organism:
Pseudodesulfovibrio aespoeensis
NCBI taxonomy Id: 643562
Other names: Desulfovibrio aespoeensis Aspo-2, Desulfovibrio aespoeensis DSM 10631, P. aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis DSM 10631
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.