STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daes_0786PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dba:Dbac_1023 protein of unknown function DUF224 cysteine-rich region domain protein. (439 aa)    
Predicted Functional Partners:
Daes_1075
PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dsa:Desal_2567 protein of unknown function DUF162.
 
 
0.839
Daes_0782
KEGG: dba:Dbac_2345 response regulator receiver protein; PFAM: response regulator receiver; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SMART: response regulator receiver.
 
  
 0.801
Daes_0784
KEGG: dba:Dbac_2343 CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein.
 
 
 0.765
Daes_1074
PFAM: protein of unknown function DUF162; KEGG: drt:Dret_1032 protein of unknown function DUF162.
 
 
 0.737
Daes_0781
KEGG: dba:Dbac_2346 formate dehydrogenase; PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein.
 
   
 0.731
Daes_0783
KEGG: dba:Dbac_2344 putative heterodisulfide reductase, C subunit.
 
   
0.665
Daes_1954
PFAM: ferredoxin-dependent glutamate synthase; KEGG: dsa:Desal_3279 ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family.
  
 
 0.623
Daes_0780
PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: dba:Dbac_2347 methyl-viologen-reducing hydrogenase delta subunit.
 
   
 0.600
Daes_0785
PFAM: UspA domain-containing protein; KEGG: dba:Dbac_2342 UspA domain protein.
  
    0.596
Daes_2577
PFAM: protein of unknown function DUF162; KEGG: sfu:Sfum_0236 hypothetical protein.
  
 
 0.590
Your Current Organism:
Pseudodesulfovibrio aespoeensis
NCBI taxonomy Id: 643562
Other names: Desulfovibrio aespoeensis Aspo-2, Desulfovibrio aespoeensis DSM 10631, P. aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis DSM 10631
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