STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daes_0942PFAM: nitrogen regulatory protein P-II; KEGG: dps:DP0349 nitrogen regulatory protein P-II family proteins. (115 aa)    
Predicted Functional Partners:
Daes_0943
PFAM: protein of unknown function DUF1538; KEGG: dps:DP0348 hypothetical protein.
 
     0.951
glnD
protein-P-II uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism.
   
 0.949
Daes_0944
PFAM: protein of unknown function DUF1538; KEGG: dps:DP0347 major facilitator superfamily permease.
 
     0.936
Daes_0941
KEGG: dps:DP0350 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein.
 
  
 0.905
Daes_0655
PFAM: nitrogen regulatory protein P-II; KEGG: dma:DMR_34880 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
     
  0.900
Daes_0656
KEGG: dsa:Desal_3438 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter.
  
 
 0.882
Daes_0957
KEGG: dsa:Desal_3066 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter.
  
 
 0.882
Daes_2635
KEGG: dde:Dde_3717 response regulator receiver sensor signal transduction histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein.
  
 
 0.758
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.729
Daes_0684
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-4 domain protein; KEGG: dma:DMR_27290 sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; GAF domain protein.
  
 
 0.548
Your Current Organism:
Pseudodesulfovibrio aespoeensis
NCBI taxonomy Id: 643562
Other names: Desulfovibrio aespoeensis Aspo-2, Desulfovibrio aespoeensis DSM 10631, P. aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis DSM 10631
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