STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daes_1105KEGG: dsa:Desal_0934 histidine kinase; PFAM: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein. (511 aa)    
Predicted Functional Partners:
Daes_1108
Response regulator receiver; KEGG: dsa:Desal_0937 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein.
 
 
 0.896
Daes_1106
KEGG: dsa:Desal_0935 hypothetical protein.
 
     0.856
Daes_1107
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: dsa:Desal_0936 TonB-dependent receptor plug.
 
     0.851
Daes_0033
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: dma:DMR_42360 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; histidine kinase A domain protein.
 
 
 0.815
Daes_0884
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold-3 domain protein; KEGG: dma:DMR_33580 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein.
 
 
 0.795
Daes_2523
ATP-binding region ATPase domain protein; KEGG: dma:DMR_02660 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver.
 
 
 0.778
Daes_3078
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; KEGG: dma:DMR_41710 two-component hybrid sensor and regulator; SMART: response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein.
 
 
 
 0.758
Daes_0029
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; GAF domain protein; KEGG: dma:DMR_43850 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein.
 
 
 0.757
Daes_1001
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; 5TM Receptors of the LytS-YhcK type transmembrane region; PAS fold-4 domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; KEGG: dma:DMR_08780 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein.
 
 
 
 0.717
Daes_2664
TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: dma:DMR_27220 two-component hybrid sensor and regulator; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein.
 
 
 
 0.711
Your Current Organism:
Pseudodesulfovibrio aespoeensis
NCBI taxonomy Id: 643562
Other names: Desulfovibrio aespoeensis Aspo-2, Desulfovibrio aespoeensis DSM 10631, P. aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis DSM 10631
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.