STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daes_1140PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA1397 putative sugar ABC transporter, permease protein. (286 aa)    
Predicted Functional Partners:
Daes_1139
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA1396 sugar ABC transporter permease.
 0.999
Daes_1141
KEGG: rpa:RPA1398 putative sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.999
Daes_1142
ABC transporter related protein; KEGG: rpa:RPA1399 putative transport system ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.993
Daes_1138
PFAM: extracellular solute-binding protein family 1; KEGG: rpa:RPA1395 trehalose/maltose binding protein.
 
 
 0.987
Daes_0641
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_0677 binding-protein-dependent transport systems inner membrane component.
 
 0.984
Daes_0638
KEGG: pwa:Pecwa_0844 ABC transporter related protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.975
Daes_0637
PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_0631 extracellular solute-binding protein family 1.
 
 
 0.974
Daes_1143
PFAM: Radical SAM domain protein; KEGG: cce:Ccel_2352 radical SAM domain protein.
 
     0.805
Daes_1144
Trimethylamine-N-oxide reductase (cytochrome c); KEGG: dvm:DvMF_1245 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; glutamine amidotransferase class-I; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.634
Daes_1137
PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: tra:Trad_0058 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
 
     0.592
Your Current Organism:
Pseudodesulfovibrio aespoeensis
NCBI taxonomy Id: 643562
Other names: Desulfovibrio aespoeensis Aspo-2, Desulfovibrio aespoeensis DSM 10631, P. aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis DSM 10631
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