close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daes_1663KEGG: dde:Dde_1853 hypothetical protein. (360 aa)    
Predicted Functional Partners:
Daes_1664
PFAM: glycosyl transferase group 1; KEGG: dde:Dde_1852 1,2-diacylglycerol 3-glucosyltransferase.
 
  
 0.947
Daes_1662
Na+/Ca+ antiporter, CaCA family; KEGG: dde:Dde_1854 K+-dependent Na+/Ca+ exchanger related-protein; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region.
 
     0.803
Daes_1660
PFAM: MscS Mechanosensitive ion channel; KEGG: dde:Dde_1856 hypothetical protein.
  
    0.774
Daes_1661
PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_1855 Zn-dependent protease with chaperone function-like.
       0.773
Daes_1665
KEGG: reh:H16_B1492 hypothetical protein.
       0.773
Daes_1659
KEGG: dno:DNO_0175 hypothetical protein.
 
     0.696
Daes_1658
PFAM: PglZ domain protein; KEGG: dno:DNO_0176 hypothetical protein.
 
     0.687
Daes_1652
PFAM: AAA ATPase central domain protein; KEGG: dno:DNO_0182 hypothetical protein.
 
     0.686
Daes_1657
KEGG: dno:DNO_0177 DEAD helicase domain-containing protein VrlO; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase.
 
    0.653
Daes_1885
KEGG: dat:HRM2_03630 putative virulence factor (pectin lyase fold protein).
  
     0.614
Your Current Organism:
Pseudodesulfovibrio aespoeensis
NCBI taxonomy Id: 643562
Other names: Desulfovibrio aespoeensis Aspo-2, Desulfovibrio aespoeensis DSM 10631, P. aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis DSM 10631
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.