STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daes_1823KEGG: dvm:DvMF_0401 thioredoxin-disulfide reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (306 aa)    
Predicted Functional Partners:
Daes_1824
Thioredoxin; KEGG: dsa:Desal_1817 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein; Belongs to the thioredoxin family.
 
 0.991
Daes_1343
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dsa:Desal_1745 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 
0.920
Daes_3077
KEGG: dma:DMR_20900 selenide, water dikinase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein.
     
 0.913
Daes_3282
Peroxiredoxin; KEGG: dsa:Desal_0033 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
 
 0.912
Daes_1704
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 0.853
bamD
Outer membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
       0.803
Daes_2300
KEGG: dsa:Desal_2803 iron-sulfur cluster-binding protein, putative.
   
 
 0.752
Daes_0150
PFAM: Thioredoxin domain-containing protein; KEGG: tmz:Tmz1t_0651 thioredoxin.
  
 
 0.744
Daes_0745
KEGG: gur:Gura_4147 hypothetical protein.
   
 
 0.724
Daes_3131
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dsa:Desal_3660 redoxin domain protein.
  
 
 0.715
Your Current Organism:
Pseudodesulfovibrio aespoeensis
NCBI taxonomy Id: 643562
Other names: Desulfovibrio aespoeensis Aspo-2, Desulfovibrio aespoeensis DSM 10631, P. aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis DSM 10631
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.