STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daes_1938PFAM: protein of unknown function DUF181; KEGG: dsa:Desal_2638 protein of unknown function DUF181. (561 aa)    
Predicted Functional Partners:
Daes_2768
KEGG: dsa:Desal_0702 CBS domain containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein.
  
     0.737
Daes_0192
PFAM: CI repressor; Peptidase S24/S26A/S26B, conserved region; KEGG: dsa:Desal_0117 putative phage repressor.
  
     0.704
Daes_0198
PFAM: Abortive infection protein; KEGG: dsa:Desal_3362 abortive infection protein.
  
  
 0.687
Daes_2609
PFAM: Abortive infection protein; KEGG: nda:Ndas_4306 abortive infection protein.
  
  
 0.687
Daes_2130
KEGG: dsa:Desal_1020 anti-sigma-28 factor FlgM family protein; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein.
  
     0.631
Daes_1104
PFAM: ABC-2 type transporter; KEGG: paa:Paes_0271 ABC-2 type transporter.
  
  
 0.617
Daes_1391
PFAM: ABC-2 type transporter; KEGG: dsa:Desal_2343 ABC-2 type transporter.
  
  
 0.617
Daes_0035
KEGG: dol:Dole_2124 hypothetical protein; TIGRFAM: SagB-type dehydrogenase domain; PFAM: nitroreductase.
  
  
 0.603
Daes_2028
KEGG: dsa:Desal_1297 hypothetical protein.
  
     0.597
Daes_1937
PFAM: SNARE associated Golgi protein; KEGG: dsa:Desal_2637 SNARE associated Golgi protein.
 
     0.586
Your Current Organism:
Pseudodesulfovibrio aespoeensis
NCBI taxonomy Id: 643562
Other names: Desulfovibrio aespoeensis Aspo-2, Desulfovibrio aespoeensis DSM 10631, P. aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis DSM 10631
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