STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daes_2030Ferredoxin I; KEGG: dde:Dde_3775 ferredoxin I. (62 aa)    
Predicted Functional Partners:
Daes_2026
KEGG: dvm:DvMF_2272 hypothetical protein.
 
     0.814
Daes_1068
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain.
  
 
 0.783
Daes_1384
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain.
  
 
 0.783
Daes_3033
TIGRFAM: adenylylsulfate reductase, alpha subunit; KEGG: dsa:Desal_0230 adenylylsulfate reductase subunit alpha.
 
 
 0.764
Daes_2985
TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; KEGG: dsa:Desal_0787 sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
 
  
 0.737
Daes_2984
TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; KEGG: dsa:Desal_0788 sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
 
  
 0.731
Daes_2066
TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: dsa:Desal_0721 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
 
 0.699
Daes_0367
PFAM: Polysulphide reductase NrfD; KEGG: dsa:Desal_0182 polysulphide reductase NrfD.
 
   
 0.625
Daes_3031
PFAM: methyl-viologen-reducing hydrogenase delta subunit; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dma:DMR_05420 quinone-interacting membrane-bound oxidoreductase complex subunit B.
 
  
 0.625
Daes_1447
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain-containing protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: dvm:DvMF_0184 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
 
 0.609
Your Current Organism:
Pseudodesulfovibrio aespoeensis
NCBI taxonomy Id: 643562
Other names: Desulfovibrio aespoeensis Aspo-2, Desulfovibrio aespoeensis DSM 10631, P. aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis DSM 10631
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