STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slip_0421KEGG: pth:PTH_1173 hypothetical protein; SPTR: A5D313 Putative uncharacterized protein. (198 aa)    
Predicted Functional Partners:
Slip_0420
KEGG: swo:Swol_0556 hypothetical protein; SPTR: Q0AZG4 Putative uncharacterized protein; TIGRFAM: stage III sporulation protein AG.
 
  
 0.989
Slip_0414
Stage III sporulation protein AA; COGs: COG3854 conserved hypothetical protein; InterPro IPR014217:IPR003593; KEGG: swo:Swol_0550 stage III sporulation protein spoIIIAA; SMART: AAA ATPase; SPTR: Q0AZH0 Stage III sporulation protein spoIIIAA; TIGRFAM: stage III sporulation protein AA; TIGRFAM: stage III sporulation protein AA.
  
  
 0.827
Slip_0419
Sporulation stage III protein AF; InterPro IPR014245; KEGG: swo:Swol_0555 hypothetical protein; PFAM: Sporulation stage III protein AF; SPTR: Q0AZG5 Putative uncharacterized protein; PFAM: Stage III sporulation protein AF (Spore_III_AF); TIGRFAM: stage III sporulation protein AF.
 
  
 0.800
Slip_1657
Stage II sporulation protein P; InterPro IPR010897; KEGG: swo:Swol_1586 hypothetical protein; PFAM: Stage II sporulation P family protein; SPTR: Q0AWL6 Putative uncharacterized protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P.
  
   
 0.794
Slip_1476
InterPro IPR010897; KEGG: swo:Swol_1339 putative stage II sporulation protein P; PFAM: Stage II sporulation P family protein; SPTR: Q0AXA7 Putative stage II sporulation protein P; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P.
  
   
 0.793
Slip_1229
InterPro IPR010897; KEGG: swo:Swol_1127 putative stage II sporulation protein P; PFAM: Stage II sporulation P family protein; SPTR: Q0AXW7 Putative stage II sporulation protein P; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P.
  
   
 0.755
Slip_0415
Sporulation stage III protein AB; InterPro IPR014198; KEGG: swo:Swol_0551 hypothetical protein; PFAM: Sporulation stage III protein AB; SPTR: Q0AZG9 Putative uncharacterized protein; PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB.
 
  
 0.720
Slip_1470
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.710
Slip_0418
Stage III sporulation protein AE; InterPro IPR014194; KEGG: swo:Swol_0554 hypothetical protein; PFAM: Sporulation stage III protein AE; SPTR: Q0AZG6 Putative uncharacterized protein; TIGRFAM: stage III sporulation protein AE; PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE.
  
  
 0.709
Slip_0416
Stage III sporulation protein AC; InterPro IPR009570; KEGG: swo:Swol_0552 hypothetical protein; PFAM: Stage III sporulation AC family protein; SPTR: Q0AZG8 Putative uncharacterized protein; TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC.
 
  
 0.694
Your Current Organism:
Syntrophothermus lipocalidus
NCBI taxonomy Id: 643648
Other names: S. lipocalidus DSM 12680, Syntrophothermus lipocalidus DSM 12680, Syntrophothermus lipocalidus TGB-C1, Syntrophothermus lipocalidus str. DSM 12680, Syntrophothermus lipocalidus strain DSM 12680
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