STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slip_1156Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (95 aa)    
Predicted Functional Partners:
Slip_1155
Addiction module toxin, RelE/StbE family; InterPro IPR000834:IPR007712:IPR012753; KEGG: hor:Hore_13720 addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; SPTR: C6PA36 Plasmid stabilization system protein; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.
 
     0.949
Slip_1158
Addiction module toxin, RelE/StbE family; InterPro IPR007712:IPR012753; KEGG: swo:Swol_0151 hypothetical protein; PFAM: plasmid stabilization system; SPTR: Q0B0J9 Putative uncharacterized protein; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.
 
     0.790
Slip_2180
InterPro IPR012753:IPR007712; KEGG: dae:Dtox_2205 addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; SPTR: C8VZP5 Addiction module toxin, RelE/StbE family; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.
 
     0.781
Slip_0544
Addiction module toxin, RelE/StbE family; InterPro IPR012753; KEGG: pth:PTH_0033 hypothetical protein; SPTR: A5D6C5 Putative uncharacterized protein; TIGRFAM: addiction module toxin, RelE/StbE family; TIGRFAM: addiction module toxin, RelE/StbE family.
 
 
 
 0.733
Slip_1301
KEGG: pth:PTH_0397 cytotoxic translational repressor; SPTR: A5D589 Cytotoxic translational repressor.
 
 
 
 0.616
Slip_1157
Addiction module antitoxin, RelB/DinJ family; COGs: COG3077 DNA-damage-inducible protein J; InterPro IPR007337; KEGG: hmo:HM1_2851 hypothetical protein; PFAM: RelB antitoxin; SPTR: B0TCH2 Putative uncharacterized protein; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family.
 
  
 0.499
Your Current Organism:
Syntrophothermus lipocalidus
NCBI taxonomy Id: 643648
Other names: S. lipocalidus DSM 12680, Syntrophothermus lipocalidus DSM 12680, Syntrophothermus lipocalidus TGB-C1, Syntrophothermus lipocalidus str. DSM 12680, Syntrophothermus lipocalidus strain DSM 12680
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.