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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slip_1237Protein of unknown function DUF35; COGs: COG3425 3-hydroxy-3-methylglutaryl CoA synthase; InterPro IPR016039:IPR013747:IPR002878; KEGG: dal:Dalk_3911 protein of unknown function DUF35; PFAM: protein of unknown function DUF35; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; SPTR: B8FJC8 Putative uncharacterized protein; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; DUF35 OB-fold domain. (470 aa)    
Predicted Functional Partners:
Slip_0284
COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016039:IPR016038; KEGG: drm:Dred_0400 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: A4J1J5 Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.999
Slip_0464
Propanoyl-CoA C-acyltransferase; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016038:IPR016039:IPR002155; KEGG: dat:HRM2_39910 AtoB4; PRIAM: Propanoyl-CoA C-acyltransferase; SPTR: C0QC32 AtoB4; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.999
Slip_0465
COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: dol:Dole_2160 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: A8ZUD2 Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.999
Slip_0479
COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: dhd:Dhaf_3545 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Q24UV1 Putative uncharacterized protein; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.999
Slip_0499
COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: swo:Swol_0789 acetyl-CoA C-acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Q0AYU4 Acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.999
Slip_0577
Thiolase; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016039:IPR002155; KEGG: dhd:Dhaf_3645 thiolase; SPTR: Q24UL8 Putative uncharacterized protein; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.999
Slip_0880
COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016039:IPR002155:IPR016038; KEGG: swo:Swol_2051 acetyl-CoA C-acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Q0AVA9 Acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.999
Slip_1236
Propanoyl-CoA C-acyltransferase; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016039:IPR002155:IPR016038; KEGG: mav:MAV_5079 acetyl-CoA acetyltransferase; PRIAM: Propanoyl-CoA C-acyltransferase; SPTR: B5HPG3 Acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
Slip_1985
COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016039:IPR016038; KEGG: drm:Dred_1491 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: A4J4L8 Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.999
Slip_1988
COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016039:IPR016038; KEGG: gme:Gmet_2268 thiolase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Q39TD0 Thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.999
Your Current Organism:
Syntrophothermus lipocalidus
NCBI taxonomy Id: 643648
Other names: S. lipocalidus DSM 12680, Syntrophothermus lipocalidus DSM 12680, Syntrophothermus lipocalidus TGB-C1, Syntrophothermus lipocalidus str. DSM 12680, Syntrophothermus lipocalidus strain DSM 12680
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