STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slip_1417COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731:IPR001308:IPR014729; KEGG: swo:Swol_0697 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; SPTR: Q0AZ33 Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain. (317 aa)    
Predicted Functional Partners:
Slip_1418
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730:IPR012255:IPR014729; KEGG: swo:Swol_0696 electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: Q0AZ34 Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain.
 0.999
Slip_2110
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014729:IPR012255:IPR014730; KEGG: tye:THEYE_A1636 electron transfer flavoprotein beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: A1HPI5 Electron transfer flavoprotein beta-subunit; PFAM: Electron transfer flavoprotein domain.
 0.999
Slip_0459
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR000049:IPR014729:IPR012255:IPR014730; KEGG: swo:Swol_2122 hypothetical protein; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: Q0AV40 Putative uncharacterized protein; PFAM: Electron transfer flavoprotein domain.
 0.995
Slip_0875
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR000049:IPR012255:IPR014729:IPR014730; KEGG: pth:PTH_1768 electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: A5D1D7 Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain.
 0.993
Slip_1087
FAD linked oxidase domain protein; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR006094:IPR004113:IPR016166:IPR016164:IPR 016167:IPR016168; KEGG: swo:Swol_1013 D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; SPTR: Q0AY77 D-lactate dehydrogenase (Cytochrome); PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD.
 
 
 0.917
Slip_0458
Conserved hypothetical protein; COGs: COG2440 Ferredoxin-like protein; InterPro IPR017900:IPR012206:IPR017896; KEGG: swo:Swol_2123 hypothetical protein; SPTR: Q0AV39 Putative uncharacterized protein.
  
 0.878
Slip_0878
COGs: COG2440 Ferredoxin-like protein; InterPro IPR017900:IPR012206:IPR017896; KEGG: sfu:Sfum_3926 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: A0LQ93 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
 0.878
Slip_1416
Protein of unknown function DUF224 cysteine-rich region domain protein; COGs: COG0247 Fe-S oxidoreductase; InterProIPR009051:IPR017896:IPR001450:IPR004017:IPR 017900:IPR012285; KEGG: swo:Swol_0698 putative iron-sulfur-binding reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q0AZ32 Putative iron-sulfur-binding reductase; PFAM: Cysteine-rich domain; Nitrate reductase gamma subunit.
 
  
 0.775
Slip_0455
COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR013786:IPR006091:IPR013764:IPR009100:IPR 009075:IPR006092:IPR006090; KEGG: dsy:DSY4721 hypothetical protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q24N82 Putative uncharacterized protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain.
 
 0.716
Slip_1241
COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR006092:IPR006091:IPR 006090:IPR006089:IPR013786:IPR013764; KEGG: drm:Dred_1490 butyryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: A1HTC4 Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
 
 0.716
Your Current Organism:
Syntrophothermus lipocalidus
NCBI taxonomy Id: 643648
Other names: S. lipocalidus DSM 12680, Syntrophothermus lipocalidus DSM 12680, Syntrophothermus lipocalidus TGB-C1, Syntrophothermus lipocalidus str. DSM 12680, Syntrophothermus lipocalidus strain DSM 12680
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