STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20059.1LemA family protein; COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: fjo:Fjoh_2124 LemA family protein; PFAM: LemA family protein; SPTR: Listeria epitope LemA; PFAM: LemA family. (185 aa)    
Predicted Functional Partners:
ADR20060.1
Galanin; KEGG: pmf:P9303_21011 galanin; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3137).
 
     0.883
ADR21965.1
Protein of unknown function DUF477; COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: phe:Phep_3604 protein of unknown function DUF477; PFAM: protein of unknown function DUF477; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF477).
 
    0.678
ADR20058.1
COGs: COG0031 Cysteine synthase; InterPro IPR001926: IPR005856: IPR005858: IPR001216; KEGG: fjo:Fjoh_2504 cysteine synthase B; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Cysteine synthase; TIGRFAM: cysteine synthase; cysteine synthase B; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.508
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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