STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20068.1KEGG: psl:Psta_4240 band 7 protein; SPTR: Putative uncharacterized protein. (132 aa)    
Predicted Functional Partners:
ADR20069.1
Smr protein/MutS2; InterPro IPR002625; KEGG: dfe:Dfer_2585 Smr protein/MutS2; PFAM: Smr protein/MutS2; SPTR: Putative uncharacterized protein; PFAM: Smr domain.
       0.516
ADR20070.1
KEGG: fps:FP1212 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.510
ADR20071.1
COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR002081: IPR006050: IPR005101: IPR018394; KEGG: dfe:Dfer_4249 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: Deoxyribodipyrimidine photolyase-class I; PFAM: FAD binding domain of DNA photolyase; DNA photolyase.
       0.459
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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