STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20115.1Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: chu:CHU_1062 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: AraC family transcriptional regulator; manually curated; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family. (202 aa)    
Predicted Functional Partners:
ADR22895.1
Peptidase S41; InterPro IPR005151; KEGG: kko:Kkor_2190 peptidase S41; PFAM: peptidase S41; SPTR: Peptidase S41; PFAM: Peptidase family S41.
  
     0.450
ADR20113.1
KEGG: chu:CHU_0232 antifreeze-related protein; SPTR: CHU large protein; antifreeze-related protein; PFAM: Protein of unknown function (DUF3494).
 
     0.432
ADR22318.1
Putative transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: gfo:GFO_1136 cyclic nucleotide-binding domain-containing protein; PFAM: cyclic nucleotide-binding; SPTR: Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain.
  
    0.427
ADR20114.1
KEGG: cpi:Cpin_6196 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.426
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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