STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20136.1KEGG: cat:CA2559_10828 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (105 aa)    
Predicted Functional Partners:
ADR20137.1
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358: IPR001440: IPR003661: IPR003594: IPR 019734: IPR005467: IPR013026; KEGG: zpr:ZPR_0864 histidine kinase; PFAM: ATP-binding region ATPase domain protein; Tetratricopeptide TPR_1 repeat-containing protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; Tetratricopeptide repeat; histidine kinase A domain protein; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Tetratricopeptide repeat.
       0.773
ADR20138.1
DNA helicase; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR003593: IPR004483; KEGG: abi:Aboo_0955 DNA helicase; SMART: AAA ATPase; SPTR: DNA helicase, putative; TIGRFAM: DNA helicase; PFAM: Type III restriction enzyme, res subunit; TIGRFAM: DNA helicase, putative.
       0.601
ADR22467.1
KEGG: cat:CA2559_02905 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.454
ADR21485.1
KEGG: gfo:GFO_3614 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.436
ADR22370.1
Hypothetical protein; InterPro IPR017941; KEGG: fps:FP2365 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.428
ADR22800.1
KEGG: zpr:ZPR_3092 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.424
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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