STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20143.1TonB-dependent receptor; InterPro IPR012910: IPR000531: IPR001412; KEGG: zpr:ZPR_2449 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent outer membrane receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (1025 aa)    
Predicted Functional Partners:
ADR20144.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: zpr:ZPR_2448 SusD/RagB family protein; PFAM: RagB/SusD domain protein; SPTR: SusD/RagB family protein; PFAM: SusD family.
     0.944
ADR20145.1
ASPIC/UnbV domain protein; InterPro IPR011519; KEGG: zpr:ZPR_2447 FG-GAP repeat-containing protein; PFAM: ASPIC/UnbV domain protein; SPTR: FG-GAP repeat-containing protein; PFAM: ASPIC and UnbV.
 
     0.824
ADR21792.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: dfe:Dfer_4455 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
 
 
 0.815
ADR20146.1
FG-GAP repeat protein; InterPro IPR013517; KEGG: rmr:Rmar_1759 ASPIC/UnbV domain protein; PFAM: FG-GAP repeat protein; SPTR: Putative uncharacterized protein; PFAM: ASPIC and UnbV; FG-GAP repeat.
 
     0.812
ADR20147.1
InterPro IPR000326; KEGG: rbi:RB2501_08560 phosphoesterase, PA-phosphatase related protein; PFAM: phosphoesterase PA-phosphatase related; SPTR: Phosphoesterase, PA-phosphatase related protein; PFAM: PAP2 superfamily.
 
     0.782
ADR22864.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: gfo:GFO_2921 SusD/RagB family protein; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein; PFAM: SusD family.
 
 
 
 0.705
ADR20165.1
RagB/SusD domain protein; InterPro IPR012944: IPR019734: IPR013026; KEGG: zpr:ZPR_3693 putative outer membrane protein probably involved in nutrient binding; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein, probably involved in nutrient binding; PFAM: SusD family.
 
 
 0.659
ADR20148.1
Alpha,alpha-trehalase; COGs: COG1626 Neutral trehalase; InterPro IPR001661: IPR018232; KEGG: cja:CJA_0284 trehalase, putative, tre37A; PFAM: glycoside hydrolase family 37; PRIAM: Alpha,alpha-trehalase; SPTR: Cytoplasmic trehalase; PFAM: Trehalase.
 
     0.582
ADR20921.1
Protein of unknown function DUF1080; InterPro IPR010496; KEGG: zpr:ZPR_4658 hypothetical protein; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080).
  
    0.561
ADR21396.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: gfo:GFO_0671 phage integrase family protein; PFAM: integrase family protein; SPTR: Phage integrase family protein; tmRNA as predicted by Rfam (RF00023), score 131.11; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.554
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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