STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20151.1KEGG: phe:Phep_1379 hypothetical protein; SPTR: Putative uncharacterized protein. (44 aa)    
Predicted Functional Partners:
ADR20152.1
SSS sodium solute transporter superfamily; COGs: COG0591 Na+/proline symporter; InterPro IPR001734: IPR019900; KEGG: gfo:GFO_1817 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Na+/solute symporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.773
ADR20150.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589; KEGG: hor:Hore_22530 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Oligo-1,6-glucosidase; PFAM: Alpha amylase, catalytic domain.
       0.547
ADR20149.1
SSS sodium solute transporter superfamily; COGs: COG4146 symporter; InterPro IPR001734: IPR019900; KEGG: rmr:Rmar_2388 SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SPTR: SSS sodium solute transporter superfamily; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.435
ADR20153.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659: IPR006665: IPR019734; KEGG: chu:CHU_2715 peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: Peptidoglycan-associated lipoprotein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
       0.416
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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