STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20156.1COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006015: IPR006016; KEGG: cts:Ctha_0244 UspA domain protein; PFAM: UspA domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Universal stress protein family. (275 aa)    
Predicted Functional Partners:
ADR20155.1
COGs: COG2094 3-methyladenine DNA glycosylase; InterPro IPR003180; KEGG: chu:CHU_1611 3-methyladenine DNA glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); PRIAM: DNA-3-methyladenine glycosylase II; SPTR: Putative 3-methyladenine DNA glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg); Belongs to the DNA glycosylase MPG family.
       0.651
ADR20154.1
Hypothetical protein; InterPro IPR019775; KEGG: rbi:RB2501_13729 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2911).
 
     0.557
ADR20157.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664: IPR011659: IPR006665; KEGG: dfe:Dfer_4115 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
  
    0.403
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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