STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20163.1Two component regulator three Y domain-containing protein; InterPro IPR011110: IPR011123: IPR013249: IPR000792; KEGG: fjo:Fjoh_4178 putative periplasmic ligand-binding sensor protein; PFAM: Two component regulator three Y domain-containing protein; Two component regulator propeller; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; SPTR: Putative periplasmic ligand-binding sensor protein; PFAM: Y_Y_Y domain; Bacterial regulatory proteins, luxR family. (966 aa)    
Predicted Functional Partners:
ADR20164.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: fjo:Fjoh_2431 TonB-dependent receptor; PFAM: TonB-dependent receptor plug; SPTR: Putative outer membrane protein probably involved in nutrient binding; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
     0.827
ADR20165.1
RagB/SusD domain protein; InterPro IPR012944: IPR019734: IPR013026; KEGG: zpr:ZPR_3693 putative outer membrane protein probably involved in nutrient binding; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein, probably involved in nutrient binding; PFAM: SusD family.
 
     0.817
ADR20166.1
PKD domain containing protein; InterPro IPR000601; KEGG: gfo:GFO_3466 glycosy hydrolase family protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Glycosyl hydrolase, family 16; PFAM: PKD domain.
 
    0.806
ADR21796.1
Serine/threonine protein kinase; COGs: COG3899 ATPase; InterProIPR017442: IPR003018: IPR010822: IPR002290: IPR 020635: IPR000719; KEGG: lic:LIC12324 serine/threonine kinase protein; PFAM: Serine/threonine-protein kinase-like domain; GAF domain protein; Stage II sporulation protein E; SMART: GAF domain protein; serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine kinase with GAF domain; PFAM: Protein kinase domain; GAF domain; Stage II sporulation protein E (SpoIIE).
  
 
 0.653
ADR20167.1
Glycoside hydrolase family 16; COGs: COG2273 Beta-glucanase/Beta-glucan synthetase; InterPro IPR000757: IPR000601: IPR018247; KEGG: hoh:Hoch_4545 glycoside hydrolase family 16; PFAM: glycoside hydrolase family 16; SPTR: Laminarinase; PFAM: Glycosyl hydrolases family 16.
 
     0.605
ADR20832.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR000700: IPR 008207: IPR001610: IPR003661: IPR003594: IPR013767: IPR004358; KEGG: chu:CHU_2784 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Multi-sensor hybrid histid [...]
 
 
 0.576
ADR20169.1
Glycoside hydrolase family 16; COGs: COG2273 Beta-glucanase/Beta-glucan synthetase; InterPro IPR000757; KEGG: hor:Hore_02670 glycoside hydrolase family 16; PFAM: glycoside hydrolase family 16; SPTR: Beta-glucanase; PFAM: Glycosyl hydrolases family 16.
 
     0.550
ADR21789.1
COGs: COG5368 conserved hypothetical protein; InterPro IPR016883; KEGG: rbi:RB2501_07305 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2329).
 
     0.518
ADR21790.1
COGs: COG5368 conserved hypothetical protein; KEGG: dfe:Dfer_4453 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2329).
 
     0.497
ADR21808.1
KEGG: dfe:Dfer_3079 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
   0.477
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.