STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20190.1Peptidase S8 and S53 subtilisin kexin sedolisin; InterPro IPR000209; KEGG: eck:EC55989_3267 conserved hypothetical protein putative serine protease; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Putative uncharacterized protein; PFAM: Subtilase family. (807 aa)    
Predicted Functional Partners:
ADR20189.1
AAA ATPase central domain protein; COGs: COG1223 ATPase (AAA+ superfamily); InterPro IPR003959: IPR003593; KEGG: ttu:TERTU_4357 AAA ATPase, central region; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: AAA ATPase, central region; PFAM: ATPase family associated with various cellular activities (AAA).
 
    0.791
ADR20191.1
KEGG: ilo:IL1588 hypothetical protein; SPTR: Predicted membrane protein.
       0.723
ADR20192.1
Hypothetical protein; COGs: COG1002 Type II restriction enzyme methylase subunits; InterPro IPR002296: IPR002052; KEGG: gur:Gura_1723 hypothetical protein; SPTR: Putative type IIS restriction/modification enzyme; PFAM: Eco57I restriction endonuclease.
       0.723
ADR22895.1
Peptidase S41; InterPro IPR005151; KEGG: kko:Kkor_2190 peptidase S41; PFAM: peptidase S41; SPTR: Peptidase S41; PFAM: Peptidase family S41.
 
   
 0.620
ADR20414.1
COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR000014: IPR004358: IPR013767: IPR013655: IPR 003661: IPR003594: IPR001610: IPR005467: IPR000700; KEGG: cyn:Cyan7425_3017 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: Sensory transduction histidine k [...]
 
   
 0.478
ADR20165.1
RagB/SusD domain protein; InterPro IPR012944: IPR019734: IPR013026; KEGG: zpr:ZPR_3693 putative outer membrane protein probably involved in nutrient binding; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein, probably involved in nutrient binding; PFAM: SusD family.
  
   0.429
ADR22251.1
Putative PAS/PAC sensor protein; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR000014: IPR001789; KEGG: zpr:ZPR_1259 PAS/PAC sensor signal transduction histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; PAS domain containing protein; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box.
  
  
 0.405
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.