STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20199.1OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: chu:CHU_2629 OmpA family outer membrane protein; PFAM: OmpA/MotB domain protein; SPTR: Outer membrane protein, OmpA family; PFAM: OmpA family. (315 aa)    
Predicted Functional Partners:
ADR20048.1
Signal transduction histidine kinase with CheB and CheR activity; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000780: IPR000673: IPR013767: IPR003661: IPR 003594: IPR000014: IPR001610: IPR005467: IPR000700: IPR002052; KEGG: cts:Ctha_1653 signal transduction histidine kinase with CheB and CheR activity; PFAM: ATP-binding region ATPase domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; PAS domain containing protein; PAC repeat-containing pr [...]
 
  
 0.954
ADR23701.1
CheB methylesterase; COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; InterPro IPR000673; KEGG: dae:Dtox_3784 CheB methylesterase; PFAM: CheB methylesterase; PRIAM: Protein-glutamate methylesterase; SPTR: CheB methylesterase; PFAM: CheB methylesterase.
 
  
 0.814
ADR22903.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterProIPR019734: IPR013026: IPR006665: IPR011659: IPR 006664: IPR018521; KEGG: chu:CHU_2715 peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SMART: Tetratricopeptide repeat; SPTR: Peptidoglycan-associated lipoprotein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
 
0.771
ADR23700.1
MCP methyltransferase, CheR-type; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780: IPR002052; KEGG: cpi:Cpin_2258 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; SPTR: CheR methyltransferase, SAM binding domain; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain.
 
  
 0.764
ADR22974.1
COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR019861: IPR006664: IPR006690; KEGG: fsu:Fisuc_0577 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; SPTR: OmpA family protein; TIGRFAM: putative membrane protein; PFAM: Protein of unknown function (DUF3308); OmpA family; TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
 
 0.716
ADR20832.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR000700: IPR 008207: IPR001610: IPR003661: IPR003594: IPR013767: IPR004358; KEGG: chu:CHU_2784 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Multi-sensor hybrid histid [...]
  
  
 0.710
ADR20102.1
Mammalian cell entry related domain protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: sli:Slin_4901 mammalian cell entry related domain protein; PFAM: Mammalian cell entry related domain protein; SPTR: Mammalian cell entry related domain protein; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein.
   
   0.663
ADR21725.1
Hypothetical protein; InterPro IPR016160; KEGG: chu:CHU_3237 hypothetical protein; SPTR: Fjo24; PFAM: Peptidase family C25.
 
  
 0.626
ADR23131.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659: IPR006665: IPR013026; KEGG: chu:CHU_1558 outer membrane protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: Outer membrane protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
 
 0.593
ADR20293.1
InterPro IPR018550; KEGG: cat:CA2559_01605 hypothetical protein; PFAM: Lipid A 3-O-deacylase-related; SPTR: Putative uncharacterized protein; PFAM: Lipid A 3-O-deacylase (PagL).
  
  
 0.566
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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