STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20207.1Amino acid/peptide transporter; COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR000109: IPR005279: IPR018456; KEGG: hoh:Hoch_6851 amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; SPTR: Putative proton-dependent peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial. (500 aa)    
Predicted Functional Partners:
ADR20208.1
KEGG: apb:SAR116_1429 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.542
ADR20209.1
Domain of unknown function DUF1987; InterPro IPR018530; KEGG: dae:Dtox_4267 hypothetical protein; PFAM: Domain of unknown function DUF1987; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1987).
       0.528
ADR20210.1
Hypothetical protein; KEGG: chu:CHU_2085 response regulator; SPTR: Putative uncharacterized protein.
       0.528
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
       0.498
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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